Shortcut: PDB2CONSTANT

Module generic
Description Usage
Create a constant value from a PDB input file used in 1 tutorialsused in 3 eggs
output value type
a value that is constructed from the information in the PDB file scalar/vector/matrix

Input

The arguments that serve as the input for this action are specified using one or more of the keywords in the following table.

Keyword Type Description
ARG scalar/vector read this single argument from the input rather than the atomic structure

Further details and examples

Text from manual goes here

Syntax

The following table describes the keywords and options that can be used with this action

Keyword Type Default Description
ARG input none read this single argument from the input rather than the atomic structure
REFERENCE compulsory none a file in pdb format containing the reference structure
NUMBER compulsory 0 if there are multiple structures in the pdb file you can specify that you want the RMSD from a specific structure by specifying its place in the file here
NOARGS optional false the arguments that are being read from the PDB file are not in the plumed input